Journal and Conference Proceedings:

Valdivia-Granda, W.A.; Larson R. Francis. 2009. ORION-VIRCAT: A Tool for Mapping ICTV and NCBI Taxonomies. Database: The Journal of Biological Databases and Curation.

Valdivia-Granda, W.A.; Larson R. Francis. 2009. Genomic Barcoding of Hemorrhagic Fever Viruses (To Appear).

Valdivia-Granda, W.A. 2009. Bioinformatics for Biodefense: A Brave New World (To Appear).

Valdivia-Granda, W.A. 2008. The Next Meta-challenge for Bioinformatics. Bioinformation 2(8):358-62.

Valdivia-Granda, W.A., Kann, MG.; Malaga, J. 2007. Host Transcriptional Interactions during smallpox infection and identification of early infection biomakers. Pacific Symposium on Biocomputing. 12:100-111.

Valdivia-Granda, W.A., Keating, K.; Kann, M.A.; Beresford, R. 2005. Integrated Nanofabrication approach for the detection of encephalic and hemorrhagic viruses. IEEE transactions in Nanotechnology.

Rahal, I,; Ren, D., Perera, A.; Najadat, H,; Perrizo, W.; Rahal R.; Valdivia-Granda, W.A. 2005. Incremental Interactive Mining of Constrained Association Rules from Biological Annotation Data with Nominal Features. SAC: 123-127.

Valdivia-Granda, W.A.; Perrizo, W.; Perera, A.; Denton, A.; Jockheck, W. 2003. Construction of yeast protein interaction networks using KNN, GA and Gene Annotation Data. Genome Informatics Meeting 2003.

Perera, A.; Denton, A.; Kotala, P. Jockheck, W. Valdivia-Granda, W.A.; Perrizo, W. 2003. P-tree Classification of Yeast Gene Deletion Data. SIGKDD Explorations 4(2):108-109.

Valdivia-Granda, W.A.; Deckard, E.; Perrizo, W. 2002. Peano Count Trees (P-Trees) and Rule Association Mining for Gene Expression Profiling of DNA Microarray Data. Proc. International Conference in Bioinformatics. Bangkok, Thailand.

Valdivia-Granda, W.A.; Deckard, E.; Perrizo, W. 2002. What difference a virtual conference makes? Proc Virt. Conf. Gen. Bioinf. 1-3.

Valdivia-Granda, W.A.; Deckard, E.L. 2000. Effects of Neutron Irradiation on Two Sunflower Inbreed Lines. Proc. Nat. Sunf. Assoc.

Books:

Valdivia-Granda, W.A. Genomic and Computational Methods for Infectious Diseases. (To appear October 2008). Springer Science+Business Media, Inc., New York, NY. USA.

Valdivia-Granda, W.A. Genomic Barcoding of Microbes. A Metagenomic Approach. (To appear July 2009). Artech, MA. USA.

Book chapters:

Valdivia-Granda, W.A. 2008. Microarray Data Clustering, Classification and Visualization. In: An Introductory Guide for Microarray Beginners (2nd Edition). Eric Blalock (Ed). Kluwer Academic Press.

Valdivia-Granda, W.A. 2008. Microarray Data Management. In: An Introductory Guide for Microarray Beginners (2nd Edition). Eric Blalock (Ed). Kluwer Academic Press.

Valdivia-Granda, W.A.; Dawn, C. 2006. Management of Microarray Gene Expression Data. An Enterprise Information Approach, Implementations and Challenges. Zongmin Ma, Jake Y. Chen, ed. Database Modeling in Biology: Theories and Practices. Springer Science+Business Media, Inc., New York, NY, USA.

Valdivia-Granda, W.A. 2003. Strategies for Clustering, Classifying, Visualizing and Standardizing Gene Expression Data. In: An Introductory Guide for Microarray Beginners. Eric Blalock (Ed). Kluwer Academic Press.